R version 4.1.1 (2021-08-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)
Matrix products: default
locale:
[1] LC_COLLATE=Danish_Denmark.1252 LC_CTYPE=Danish_Denmark.1252
[3] LC_MONETARY=Danish_Denmark.1252 LC_NUMERIC=C
[5] LC_TIME=Danish_Denmark.1252
attached base packages:
[1] parallel stats4 stats graphics grDevices utils datasets
[8] methods base
other attached packages:
[1] randomForest_4.6-14 cluster_2.1.2
[3] glmnet_4.1-2 Matrix_1.3-4
[5] SpiecEasi_1.1.1 ggrepel_0.9.1
[7] picante_1.8.2 nlme_3.1-153
[9] ips_0.0.11 ape_5.5
[11] dada2_1.20.0 Rcpp_1.0.7
[13] MicEco_0.9.16 DAtest_2.7.18
[15] vegan_2.5-7 lattice_0.20-44
[17] permute_0.9-5 phyloseq_1.36.0
[19] multcomp_1.4-17 TH.data_1.0-10
[21] MASS_7.3-54 survival_3.2-11
[23] mvtnorm_1.1-2 ggplot2_3.3.5
[25] DESeq2_1.32.0 SummarizedExperiment_1.22.0
[27] Biobase_2.52.0 MatrixGenerics_1.4.3
[29] matrixStats_0.60.1 GenomicRanges_1.44.0
[31] GenomeInfoDb_1.28.4 IRanges_2.26.0
[33] S4Vectors_0.30.0 BiocGenerics_0.38.0
loaded via a namespace (and not attached):
[1] uuid_0.1-4 snow_0.4-3 backports_1.2.1
[4] fastmatch_1.1-3 Hmisc_4.5-0 VGAM_1.1-5
[7] plyr_1.8.6 igraph_1.2.6 repr_1.1.3
[10] splines_4.1.1 BiocParallel_1.26.2 digest_0.6.27
[13] foreach_1.5.1 htmltools_0.5.2 fansi_0.5.0
[16] magrittr_2.0.1 checkmate_2.0.0 memoise_2.0.0
[19] doParallel_1.0.16 Biostrings_2.60.2 annotate_1.70.0
[22] RcppParallel_5.1.4 sandwich_3.0-1 bdsmatrix_1.3-4
[25] jpeg_0.1-9 colorspace_2.0-2 blob_1.2.2
[28] xfun_0.25 dplyr_1.0.7 crayon_1.4.1
[31] RCurl_1.98-1.4 jsonlite_1.7.2 genefilter_1.74.0
[34] lme4_1.1-27.1 phangorn_2.7.1 zoo_1.8-9
[37] iterators_1.0.13 glue_1.4.2 gtable_0.3.0
[40] zlibbioc_1.38.0 XVector_0.32.0 DelayedArray_0.18.0
[43] Rhdf5lib_1.14.2 shape_1.4.6 abind_1.4-5
[46] scales_1.1.1 pheatmap_1.0.12 DBI_1.1.1
[49] xtable_1.8-4 htmlTable_2.2.1 foreign_0.8-81
[52] bit_4.0.4 Formula_1.2-4 htmlwidgets_1.5.4
[55] httr_1.4.2 pulsar_0.3.7 RColorBrewer_1.1-2
[58] ellipsis_0.3.2 pkgconfig_2.0.3 XML_3.99-0.7
[61] nnet_7.3-16 locfit_1.5-9.4 utf8_1.2.2
[64] tidyselect_1.1.1 rlang_0.4.11 reshape2_1.4.4
[67] AnnotationDbi_1.54.1 munsell_0.5.0 tools_4.1.1
[70] cachem_1.0.6 generics_0.1.0 RSQLite_2.2.8
[73] ade4_1.7-17 evaluate_0.14 biomformat_1.20.0
[76] stringr_1.4.0 fastmap_1.1.0 knitr_1.34
[79] bit64_4.0.5 purrr_0.3.4 KEGGREST_1.32.0
[82] compiler_4.1.1 rstudioapi_0.13 png_0.1-7
[85] huge_1.3.5 tibble_3.1.4 geneplotter_1.70.0
[88] stringi_1.7.4 IRdisplay_1.0 nloptr_1.2.2.2
[91] multtest_2.48.0 vctrs_0.3.8 pillar_1.6.2
[94] lifecycle_1.0.0 rhdf5filters_1.4.0 eulerr_6.1.1
[97] data.table_1.14.0 cowplot_1.1.1 bitops_1.0-7
[100] hwriter_1.3.2 R6_2.5.1 latticeExtra_0.6-29
[103] ShortRead_1.50.0 gridExtra_2.3 codetools_0.2-18
[106] boot_1.3-28 assertthat_0.2.1 rhdf5_2.36.0
[109] withr_2.4.2 Rsamtools_2.8.0 GenomicAlignments_1.28.0
[112] GenomeInfoDbData_1.2.6 mgcv_1.8-36 doSNOW_1.0.19
[115] quadprog_1.5-8 grid_4.1.1 rpart_4.1-15
[118] IRkernel_1.2 minqa_1.2.4 pbdZMQ_0.3-5
[121] bbmle_1.0.24 pROC_1.18.0 numDeriv_2016.8-1.1
[124] base64enc_0.1-3